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Single Molecule Fluorescence in situ Hybridization in Whole Mount Tissue

Abstract

Traditional in situ hybridization is a powerful tool for the localization of RNA molecules within plant tissues. However the sensitivity of this technique is limited to single cell resolution and is unable to discriminate between sub-cellular expression domains. Single molecule fluorescent in situ hybridization (smFISH) is an evolution of this technique that allows for the resolution of expression to the level of a single messenger or non-coding RNA. This technique relies on the use of multiple fluorescent probes targeted to a single RNA sequence, which amplifies the signal such that is it visible using epi-fluorescent imaging. This allows both the localization and the quantification of single RNA molecules thus providing an increased level of precision in the study of gene expression.

Subjects

INDEPTH_4,

DOI (Digital Object Identifier)

Permanent link to this resource: https://doi.org/10.24384/4h9v-ar37

Attachments

Authors

Parry, Geraint

Contributors

Project Members: Rosa, Stefanie

Oxford Brookes departments

Department of Biological and Medical Sciences

Dates

Year: 2020

Funding

European Cooperation in Science and Technology (COST) : Impact of Nuclear Domains On Gene Expression and Plant Traits (CA16212)


Creative Commons License This work is licensed under a Creative Commons Attribution 4.0 International License


Related resources

This RADAR resource is Part of INDEPTH COST Action CA16212

Details

  • Owner: Geraint Parry
  • Collection: Research
  • Version: 1 (show all)
  • Status: Live
  • Views (since Sept 2022): 122